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RNA-seq pathway analysis
RNA-seq pathway analysis
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RNA-seq pathway analysis
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EPISODES
Summary and Schedule
1. Introduction
2. Gene Ontology testing with
clusterProfiler
3. KEGG enrichment analysis with
clusterProfiler
4. Gene set enrichment analysis with
fgsea
5. Analysis with
RegEnrich
6. Interaction networks with
StringDB
7. Conclusion
RESOURCES
Key Points
Instructor Notes
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Instructor Notes
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Introduction
Gene Ontology testing with
clusterProfiler
KEGG enrichment analysis with
clusterProfiler
Gene set enrichment analysis with
fgsea
Analysis with
RegEnrich
Interaction networks with
StringDB
Conclusion
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